Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946230.1_cds_XP_016488462.1_79095
CDS Infomation

[gene=LOC107808448] [db_xref=GeneID:107808448] [protein=RNA polymerase II subunit 5-mediating protein homolog isoform X2] [protein_id=XP_016488462.1] [location=join(53679..53689,54616..54826,55529..55595,55709..55968,56072..56152,56306..56333,57122..57234,57911..58024)] [gbkey=CDS]
Sequence

ATGAATTTCTGGGTTATTTTCCTTACAACTGTTTTACTGCTTTTCTGGCGTAAGGTTCTA
TTGGGAGAGGGTTATTACGCAGAAAGGACATCCAAGCAAACGACTGAGTTACTGAAAAGA
AGAGGGAAGGATTTAGAGTCCCAAGTGGAATCTGTAAAGGCTGTGATACAAGACCTTAAG
GCCGAGGCTTCATTTTTTGATGCTACAGCTTCTGAGGCTGCGGAAGGTCTTGTAGAGATC
AGAGAAGACTATGCTGAGGAAACTTCTCCTGAAGAGTCATCCACAGTTGGCATCCTGAAA
CCTGAGCTTCCAATTTCTTCTGAAGGAGACGATGCTGAACTTGCAGTTGAAAATGAGGAA
TATGCTCGCATTTTATCCCGGATTGCCGAGCTTGAGAAGGAAGAAGAAGAGGCTGAAAAT
CCCGAACTTGAGAAGGAAGAAGAAGAAGCTGAAATTGACAATAAATTCAATGAAGAAGAG
CTGGGTAAATCTGGATTAGATGTCAGCACAGGTCAATACATCCGGGACCAAGAAATAAAC
AATTCTGGAGTGCGTGGTTCTAGTAATCTCAAGGAAAGAGCAGCATCTTCAAGAGATCAC
TCCATTGAAAGTTTTCCTGAACAGCTGCACGTTGAAAGTTCAAAATCAGTAACTAAAGAT
GAATGCTTAGCTTGGAGCCTAGCTTCTGACGAGTCCAATGTTACTGAGAATGCTCCAAAA
CAGAATCGAATGAAGGAGGATACTAATGTTCCTATGATAGCTGAAAATAAGGCTTTTACT
GGAAGTATTGTTGAACGCGCTGGTGCCTTTGATATCAAGCCAAGCGAGCAGACTGTTGGT
CGTAGCACAAAGCCAGTATCAAGGTTCAAAATGCAGAGGAAATAG

Peptide Sequence

PEP ID

XP_016488462.1
PEP Infomation

PREDICTED: RNA polymerase II subunit 5-mediating protein homolog isoform X2 [Nicotiana tabacum]
Sequence

MNFWVIFLTTVLLLFWRKVLLGEGYYAERTSKQTTELLKRRGKDLESQVESVKAVIQDLK
AEASFFDATASEAAEGLVEIREDYAEETSPEESSTVGILKPELPISSEGDDAELAVENEE
YARILSRIAELEKEEEEAENPELEKEEEEAEIDNKFNEEELGKSGLDVSTGQYIRDQEIN
NSGVRGSSNLKERAASSRDHSIESFPEQLHVESSKSVTKDECLAWSLASDESNVTENAPK
QNRMKEDTNVPMIAENKAFTGSIVERAGAFDIKPSEQTVGRSTKPVSRFKMQRK

Transcript Sequence

Gene sequence data has not been registered.